6JJE
Crystal structure of a two-quartet DNA mixed-parallel/antiparallel G-quadruplex (BrU)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-05 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.91944 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 44.786, 47.454, 37.782 |
Unit cell angles | 90.00, 109.96, 90.00 |
Refinement procedure
Resolution | 31.490 - 1.378 |
R-factor | 0.1976 |
Rwork | 0.196 |
R-free | 0.22500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6jjf |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.428 |
High resolution limit [Å] | 1.378 | 1.378 |
Rmerge | 0.063 | 0.289 |
Number of reflections | 15296 | |
<I/σ(I)> | 11.536 | |
Completeness [%] | 99.2 | 99.6 |
Redundancy | 6.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 283 | Potassium cacodylate,Sodium cacodylate,Potassium chloride,Sodium chloride,hexammine cobalt(III) chloride,MPD |