6JFB
Crystal structure of human pyruvate kinase M2 isoform
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-07-16 |
Detector | Bruker DIP-6040 |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 76.763, 152.573, 94.405 |
Unit cell angles | 90.00, 97.88, 90.00 |
Refinement procedure
Resolution | 29.960 - 2.120 |
R-factor | 0.19489 |
Rwork | 0.192 |
R-free | 0.25071 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.405 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0230) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.200 |
High resolution limit [Å] | 2.120 | 2.120 |
Number of reflections | 121473 | |
<I/σ(I)> | 26.12 | |
Completeness [%] | 99.8 | |
Redundancy | 4.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | 0.1 M Tris, pH 7.5, 0.2 M NaCl, 14% w/v polyethylene glycol 3350 |