6JDT
Crystal structure of GH10 family xylanase XynAF1 from Aspergillus fumigatus Z5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-10-10 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 |
Unit cell lengths | 44.606, 57.575, 65.088 |
Unit cell angles | 73.86, 80.39, 68.35 |
Refinement procedure
Resolution | 50.000 - 1.680 |
R-factor | 0.1374 |
Rwork | 0.136 |
R-free | 0.16780 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.021 |
RMSD bond angle | 1.966 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.710 |
High resolution limit [Å] | 1.680 | 1.680 |
Rmerge | 0.105 | 0.447 |
Number of reflections | 62812 | |
<I/σ(I)> | 12.59 | 7.3 |
Completeness [%] | 96.1 | 93.4 |
Redundancy | 2.7 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1M MES pH6.5, 25%(w/v) PEG 6000 |