6JDH
Crystal structure of N-acetyl mannosmaine kinase from Pasteurella multocida
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-06 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97856 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 126.336, 126.336, 82.420 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.565 - 1.900 |
R-factor | 0.198 |
Rwork | 0.196 |
R-free | 0.23000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6jda |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.14_3211: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.580 | 45.580 | 1.940 |
High resolution limit [Å] | 1.900 | 9.110 | 1.900 |
Rmerge | 0.080 | 0.037 | 1.193 |
Rmeas | 0.085 | 0.040 | 1.279 |
Rpim | 0.027 | 0.014 | 0.456 |
Number of reflections | 59936 | 604 | 3836 |
<I/σ(I)> | 17.2 | ||
Completeness [%] | 99.9 | 98.7 | 99.5 |
Redundancy | 9.7 | 8.4 | 7.7 |
CC(1/2) | 0.999 | 0.999 | 0.783 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 0.1M Tascimate 5.0, 20% v/v Isopropanol, 20% w/v PEG 4000 with an additive containing 2M NaCl |