Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6JDB

Crystal structure of N-acetyl mannosmaine kinase in complex with ManNAc-6P and ADP from Haemophilus influenzae

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 1
Synchrotron siteSOLEIL
BeamlinePROXIMA 1
Temperature [K]100
Detector technologyPIXEL
Collection date2016-09-29
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97857 A
Spacegroup nameI 41 2 2
Unit cell lengths92.591, 92.591, 183.321
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.280 - 2.650
R-factor0.2165
Rwork0.213
R-free0.27560
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6jda
Data reduction softwareXDS
Data scaling softwareAimless (0.7.2)
Phasing softwarePHASER
Refinement softwarePHENIX ((1.14_3211: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]46.30046.3002.770
High resolution limit [Å]2.6408.7702.640
Rmerge0.0940.0320.947
Rmeas0.1040.0371.035
Rpim0.0430.0170.412
Number of reflections120213861528
<I/σ(I)>11.9
Completeness [%]99.698.398
Redundancy5.94.86.2
CC(1/2)0.9980.9990.828
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52910.2M Ammonium phosphate monobasic, 0.1M Tris pH 8.5, 50% v/v MPD

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon