6JD5
ATPase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97890 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 51.449, 69.691, 75.963 |
Unit cell angles | 90.00, 100.57, 90.00 |
Refinement procedure
Resolution | 38.707 - 2.200 |
R-factor | 0.1781 |
Rwork | 0.176 |
R-free | 0.22510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4nh0 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.976 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 74.674 | 40.933 | 2.320 |
High resolution limit [Å] | 2.200 | 6.960 | 2.200 |
Rmerge | 0.030 | 0.642 | |
Rmeas | 0.099 | 0.032 | 0.694 |
Rpim | 0.037 | 0.013 | 0.261 |
Total number of observations | 184657 | 5870 | 27445 |
Number of reflections | 26929 | 887 | 3933 |
<I/σ(I)> | 13.5 | 38.4 | 2.8 |
Completeness [%] | 99.9 | 99.2 | 100 |
Redundancy | 6.9 | 6.6 | 7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | 0.1 M BIS-TRIS pH 6.5, 45% (v/v) PEG400 |