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6JCH

Crystal structure of SpaE basal pilin from Lactobacillus rhamnosus GG - Orthorhombic form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsRRCAT INDUS-2 BEAMLINE PX-BL21
Synchrotron siteRRCAT INDUS-2
BeamlinePX-BL21
Temperature [K]100
Detector technologyCCD
Collection date2016-05-18
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.97947
Spacegroup nameP 21 21 21
Unit cell lengths41.382, 63.523, 130.245
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution23.736 - 1.536
R-factor0.1816
Rwork0.180
R-free0.21830
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6jbv
RMSD bond length0.006
RMSD bond angle0.847
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.14_3260: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]57.0941.562
High resolution limit [Å]1.5361.536
Rmerge0.0460.501
Rmeas0.0490.568
Rpim0.0190.261
Number of reflections520182453
<I/σ(I)>21.32.3
Completeness [%]99.796.7
Redundancy6.84.4
CC(1/2)0.9990.832
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52950.1 M bis-tris propane pH 8.5, 0.25 M sodium formate, 25% (w/v) PEG 3350, 0.2 M sodium iodide, 0.02 M L-proline

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PDB entries from 2024-11-06

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