Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6J9D

Babesia microti lactate dehydrogenase R99A (BmLDHR99A)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeLIQUID ANODE
Source detailsExcillum MetalJet D2+ 160 kV
Temperature [K]277
Detector technologyCCD
Collection date2018-12-15
DetectorRIGAKU JUPITER 210
Wavelength(s)0.97890
Spacegroup nameP 32 2 1
Unit cell lengths147.332, 147.332, 65.773
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution35.715 - 2.904
R-factor0.2909
Rwork0.289
R-free0.32170
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.692
Data reduction softwareHKL-2000 (V718)
Data scaling softwareHKL-2000
Phasing softwareHKL-3000
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.0003.000
High resolution limit [Å]2.9002.900
Rmerge0.0710.071
Rmeas0.0810.081
Rpim0.0380.038
Number of reflections1819918429
<I/σ(I)>2.692.69
Completeness [%]98.9
Redundancy13
CC(1/2)0.9890.989
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.2 M Calcium Chloride, 0.1 M Tris:HCl pH 8.5, 15-18% (w/v) PEG 4000.

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon