6J8L
Phytophthora sojae effector PsAvh240 inhibits a host aspartic protease secretion to promote infection
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-01-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 35.350, 65.679, 143.199 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.320 - 2.300 |
R-factor | 0.213 |
Rwork | 0.211 |
R-free | 0.25160 |
Structure solution method | MAD |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 10.000 | 2.340 |
High resolution limit [Å] | 2.300 | 6.240 | 2.300 |
Rmerge | 0.106 | 0.069 | 0.800 |
Rmeas | 0.116 | 0.076 | 0.893 |
Rpim | 0.046 | 0.031 | 0.376 |
Number of reflections | 15483 | 881 | 782 |
<I/σ(I)> | 4.8 | ||
Completeness [%] | 99.7 | 99.1 | 99.7 |
Redundancy | 6.3 | 5.7 | 5.4 |
CC(1/2) | 0.996 | 0.717 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 4 | 277 | 20% PEG3350, 0.1 M sodium acetate (pH 4.0), and 0.2 M lithium sulfate |