6J6M
Co-crystal structure of BTK kinase domain with Zanubrutinib
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 93 |
Detector technology | PIXEL |
Collection date | 2018-10-01 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.97894 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 37.924, 71.988, 104.429 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.267 - 1.250 |
R-factor | 0.1576 |
Rwork | 0.157 |
R-free | 0.16370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5p9j |
RMSD bond length | 0.005 |
RMSD bond angle | 0.939 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1-2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.270 | 1.270 |
High resolution limit [Å] | 1.250 | 1.250 |
Rmerge | 0.072 | 0.263 |
Rmeas | 0.078 | 0.317 |
Rpim | 0.030 | 0.171 |
Number of reflections | 75073 | 2203 |
<I/σ(I)> | 19.7 | |
Completeness [%] | 93.9 | 56.2 |
Redundancy | 11.9 | 5 |
CC(1/2) | 0.999 | 0.944 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.1 M MIB buffer pH7, 25% (w/v) PEG 1500 |