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6J00

The RNA-dependent RNA polymerase domain of dengue 3 NS5

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL26B2
Synchrotron siteSPring-8
BeamlineBL26B2
Temperature [K]100
Detector technologyCCD
Collection date2016-09-30
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1
Spacegroup nameC 2 2 21
Unit cell lengths161.520, 177.360, 58.010
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution51.519 - 2.140
R-factor0.2206
Rwork0.219
R-free0.24980
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2j7u
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHENIX
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]62.7002.200
High resolution limit [Å]2.1402.140
Number of reflections463983359
<I/σ(I)>12.06
Completeness [%]99.9
Redundancy7.4
CC(1/2)0.9980.616
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29316% polyethylene glycol 10000 and 100 mM Tris-HCl (pH 8.0)

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PDB entries from 2024-08-28

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