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6IZZ

The RNA-dependent RNA polymerase domain of dengue 3 NS5, bound with RK-0404678

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL26B2
Synchrotron siteSPring-8
BeamlineBL26B2
Temperature [K]100
Detector technologyCCD
Collection date2016-10-13
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1
Spacegroup nameC 2 2 21
Unit cell lengths164.040, 179.290, 58.270
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution56.153 - 1.970
R-factor0.2246
Rwork0.223
R-free0.25520
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2j7u
RMSD bond length0.005
RMSD bond angle0.725
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.13_2998: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]64.6702.020
High resolution limit [Å]1.9701.970
Number of reflections608634487
<I/σ(I)>13.8
Completeness [%]99.4
Redundancy7.3
CC(1/2)0.9980.609
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29316% polyethylene glycol 10000 and 100 mM Tris-HCl (pH 8.0)

221716

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