6IZZ
The RNA-dependent RNA polymerase domain of dengue 3 NS5, bound with RK-0404678
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL26B2 |
| Synchrotron site | SPring-8 |
| Beamline | BL26B2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-10-13 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 1 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 164.040, 179.290, 58.270 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 56.153 - 1.970 |
| R-factor | 0.2246 |
| Rwork | 0.223 |
| R-free | 0.25520 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2j7u |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.725 |
| Data reduction software | xia2 |
| Data scaling software | xia2 |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 64.670 | 2.020 |
| High resolution limit [Å] | 1.970 | 1.970 |
| Number of reflections | 60863 | 4487 |
| <I/σ(I)> | 13.8 | |
| Completeness [%] | 99.4 | |
| Redundancy | 7.3 | |
| CC(1/2) | 0.998 | 0.609 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 16% polyethylene glycol 10000 and 100 mM Tris-HCl (pH 8.0) |






