6IXG
Crystal structure of native apo SH3BP5 (P41)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-04 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 41 |
Unit cell lengths | 79.958, 79.958, 94.353 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.979 - 3.801 |
R-factor | 0.2439 |
Rwork | 0.242 |
R-free | 0.27810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ixe |
RMSD bond length | 0.003 |
RMSD bond angle | 0.678 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.870 |
High resolution limit [Å] | 3.800 | 3.800 |
Number of reflections | 5605 | 237 |
<I/σ(I)> | 14.9 | |
Completeness [%] | 94.4 | |
Redundancy | 9.1 | |
CC(1/2) | 0.970 | 0.758 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.4M Mg(NO3)2, 0.1M Tris-Cl pH 8.0, 22% PEG 8000 |