6IX8
The structure of LepI C52A in complex with SAM and its substrate analogue
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-24 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.97930 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 160.800, 62.562, 113.836 |
Unit cell angles | 90.00, 113.34, 90.00 |
Refinement procedure
Resolution | 28.802 - 1.659 |
R-factor | 0.1692 |
Rwork | 0.168 |
R-free | 0.19720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ix3 |
RMSD bond length | 0.018 |
RMSD bond angle | 1.496 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX (1.12_2829) |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.690 |
High resolution limit [Å] | 1.658 | 1.658 |
Rmerge | 0.066 | 1.072 |
Number of reflections | 122483 | 4777 |
<I/σ(I)> | 25.8 | |
Completeness [%] | 99.7 | |
Redundancy | 6.2 | |
CC(1/2) | 0.731 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.2M ammonium chloride, 0.1M MES(pH 6), 20%(w/v) PEG 6000 |