6IVH

Crystal structure of the N-terminal domain of ScpA derived from Thermococcus onnurineus

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	PAL/PLS BEAMLINE 5C (4A)
Synchrotron site	PAL/PLS
Beamline	5C (4A)
Temperature [K]	100
Detector technology	CCD
Collection date	2014-06-25
Detector	ADSC QUANTUM 315r
Wavelength(s)	0.979
Spacegroup name	P 61
Unit cell lengths	76.984, 76.984, 39.934
Unit cell angles	90.00, 90.00, 120.00

Refinement procedure

Resolution	38.492 - 2.500
R-factor	0.2416
Rwork	0.239
R-free	0.25890
Structure solution method	SAD
RMSD bond length	0.004
RMSD bond angle	0.732
Data reduction software	HKL-2000
Data scaling software	HKL-2000
Phasing software	SOLVE
Refinement software	PHENIX (1.10.1_2155)

Data quality characteristics

	Overall	Inner shell	Outer shell
Low resolution limit [Å]	50.000	50.000	2.540
High resolution limit [Å]	2.500	6.780	2.500
Rmerge	0.079	0.054	0.279
Rmeas	0.084	0.056	0.324
Rpim	0.028	0.017	0.159
Number of reflections	8911	460	412
<I/σ(I)>	15.6
Completeness [%]	97.2	99.6	89.6
Redundancy	6.7	10.8	3
CC(1/2)		0.999	0.327

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP	7.5	295	crystal growth at 3.5 M sodium formate and 0.1 M sodium malonate, dehydration for 2 h in the reservoir solution containing additional 10% glycerol