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6ITD

Crystal structure of BioU (K124A) from Synechocystis sp.PCC6803 in complex with the analog of reaction intermediate, 3-(1-aminoethyl)-nonanedioic acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE AR-NE3A
Synchrotron sitePhoton Factory
BeamlineAR-NE3A
Temperature [K]100
Detector technologyPIXEL
Collection date2018-06-17
DetectorDECTRIS PILATUS 2M
Wavelength(s)1.0
Spacegroup nameP 31 2 1
Unit cell lengths71.167, 71.167, 98.211
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution61.630 - 2.000
R-factor0.19033
Rwork0.187
R-free0.24883
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ir4
RMSD bond length0.008
RMSD bond angle1.238
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]61.6302.030
High resolution limit [Å]2.0002.000
Rmerge0.0910.588
Rpim0.0350.203
Number of reflections19876981
<I/σ(I)>31.9
Completeness [%]99.9
Redundancy8.7
CC(1/2)0.9980.973
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP829320% (w/v) polyethylene glycol 3350, 0.2 M ammonium acetate, 5mM 3-(1-aminoethyl)-nonanedioic acid

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