6IQZ
High resolution structure of bilirubin oxidase from Myrothecium verrucaria - wild type
Replaces: 5ZD6Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL32XU |
Synchrotron site | SPring-8 |
Beamline | BL32XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-10-08 |
Detector | RAYONIX MX225-HS |
Wavelength(s) | 1.0000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 138.342, 83.553, 52.690 |
Unit cell angles | 90.00, 95.73, 90.00 |
Refinement procedure
Resolution | 35.712 - 1.460 |
R-factor | 0.1322 |
Rwork | 0.131 |
R-free | 0.16960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2xll |
RMSD bond length | 0.007 |
RMSD bond angle | 1.127 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.14_3235: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.490 |
High resolution limit [Å] | 1.460 | 1.460 |
Rmerge | 0.088 | 0.691 |
Number of reflections | 102516 | |
<I/σ(I)> | 16.41 | 1.76 |
Completeness [%] | 99.7 | |
Redundancy | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 0.1M SODIUM CITRATE PH 5.0, 20% (W/V) PEG 8000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K |