6ILT
Structure of Arabidopsis thaliana Ribokinase complexed with ATP and Magnesium ion
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-05-08 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.97933 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 99.445, 99.445, 164.952 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.343 - 2.200 |
R-factor | 0.2263 |
Rwork | 0.224 |
R-free | 0.26830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ilr |
RMSD bond length | 0.009 |
RMSD bond angle | 1.250 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.280 |
High resolution limit [Å] | 2.200 | 2.200 |
Number of reflections | 40517 | |
<I/σ(I)> | 19 | 1.2 |
Completeness [%] | 93.3 | |
Redundancy | 9.3 | |
CC(1/2) | 0.998 | 0.618 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.1M sodium citrate (pH 5.5), 40% (v/v) PEG 600 |