6IJ9
Crystal Structure of Arabidopsis thaliana UGT89C1 complexed with UDP
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | NFPSS BEAMLINE BL19U1 |
Synchrotron site | NFPSS |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-11-11 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97853 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 92.979, 84.141, 129.146 |
Unit cell angles | 90.00, 108.90, 90.00 |
Refinement procedure
Resolution | 29.931 - 3.000 |
R-factor | 0.22 |
Rwork | 0.217 |
R-free | 0.27380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ij7 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 10.000 | 3.110 |
High resolution limit [Å] | 3.000 | 6.460 | 3.000 |
Rmerge | 0.083 | 0.039 | 0.616 |
Rmeas | 0.098 | 0.046 | 0.730 |
Rpim | 0.052 | 0.025 | 0.387 |
Total number of observations | 134011 | ||
Number of reflections | 39311 | 4023 | 3877 |
<I/σ(I)> | 6.1 | ||
Completeness [%] | 98.7 | 98 | 97.4 |
Redundancy | 3.4 | 3.3 | 3.4 |
CC(1/2) | 0.997 | 0.872 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.1M ammonium sulfate, 0.1M HEPES pH 7.5, 20%(w/v) PEG8000 and 10%(v/v) 2-propanol |