6IEZ
Crystal structure of CERT START domain in complex with compound B16
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-05 |
Detector | DECTRIS PILATUS3 S 2M |
Wavelength(s) | 1.0 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 59.861, 59.861, 152.447 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.000 - 1.900 |
R-factor | 0.2037 |
Rwork | 0.202 |
R-free | 0.24430 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.585 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.1) |
Phasing software | REFMAC (5.8.0222) |
Refinement software | REFMAC (5.8.0222) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.080 | 47.080 | 1.940 |
High resolution limit [Å] | 1.900 | 9.110 | 1.900 |
Rmerge | 0.058 | 0.022 | 0.671 |
Rmeas | 0.063 | 0.025 | 0.733 |
Rpim | 0.025 | 0.011 | 0.291 |
Total number of observations | 146641 | 1434 | 8891 |
Number of reflections | 22756 | 261 | 1436 |
<I/σ(I)> | 8.9 | 34.6 | 1 |
Completeness [%] | 100.0 | 99.4 | 99.7 |
Redundancy | 6.4 | 5.5 | 6.2 |
CC(1/2) | 0.998 | 0.994 | 0.687 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.9 | 293 | 0.1M trisodium citrate/HCl buffer, pH 5.9, containing 24% PEG3350 and 0.2% n-octyl-beta-D-glucoside |