6IBI
Copper binding protein from Laetisaria arvalis (LaX325)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-06 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.299 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 84.599, 84.635, 127.319 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.350 - 2.080 |
R-factor | 0.2454 |
Rwork | 0.244 |
R-free | 0.27087 |
Structure solution method | SAD |
RMSD bond length | 0.011 |
RMSD bond angle | 1.383 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0230) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 | 2.130 |
High resolution limit [Å] | 2.080 | 2.080 |
Rmeas | 0.152 | 1.398 |
Number of reflections | 57268 | 4005 |
<I/σ(I)> | 12.93 | 1.07 |
Completeness [%] | 99.6 | 98.5 |
Redundancy | 14 | 14.3 |
CC(1/2) | 0.998 | 0.744 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | MRC plates with 1:1 ratio drops (enzyme:reservoir solution) and 100 ul reservoir using an Oryx-8 robot. Protein: 13.3 mg/ml in 20 mM MES pH 6.0. Reservoir: 20 mM L-Na-Glutamate, 20 mM DL-Alanine (racemic), 20 mM Glycine, 20 mM DL-Lysine HCl (racemic), 20 mM DL-Serine (racemic), 50 mM MES monohydrate pH 6.5, 50 mM imidazole pH 6.5. 20% (w/v) PEG 500 MME and 10% (w/v) PEG 20000. |