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6I8G

Structure of the plant immune signaling node EDS1 (enhanced disease susceptibility 1) in complex with nanobody ENB73

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2018-01-28
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.967700
Spacegroup nameC 1 2 1
Unit cell lengths177.504, 68.232, 105.273
Unit cell angles90.00, 123.44, 90.00
Refinement procedure
Resolution52.570 - 2.344
R-factor0.195
Rwork0.194
R-free0.22200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4nfu
RMSD bond length0.002
RMSD bond angle0.522
Data reduction softwareXDS (VERSION Jan 26, 2018)
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.14_3260: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]83.7732.565
High resolution limit [Å]2.3442.344
Rmerge0.1170.870
Number of reflections315501577
<I/σ(I)>81.5
Completeness [%]71.115.1
Redundancy3.63.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP277.15Reservoir composition: 17.5 % (w/v) PEG3350, 0.2 M sodium citrate, 0.1 M Bis-Tris buffer, pH 8.5; Protein stock solution: 2.8 mg/ml protein in 50 mM sodium chloride, 1 % (v/v) glycerole, 1mM DTT, 50 mM HEPES, pH 8.0; drop composition: 1 mikroliter protein stock solution + 1 mikroliter reservoir solution; crystals were cryoprotected in 17.5 % (w/v) PEG3350, 20 % (v/v) ethylene glycol, 0.2 M sodium citrate, 0.1 M Bis-Tris buffer, pH 8.5.

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