6I50
Structure of Eiger TNF from S. frugiperda
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-11 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9795 |
Spacegroup name | H 3 |
Unit cell lengths | 55.222, 55.222, 142.096 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.365 - 1.690 |
R-factor | 0.1565 |
Rwork | 0.155 |
R-free | 0.18200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1u5y |
RMSD bond length | 0.004 |
RMSD bond angle | 0.766 |
Data reduction software | DIALS |
Data scaling software | DIALS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.400 | 1.720 |
High resolution limit [Å] | 1.690 | 1.690 |
Number of reflections | 17657 | 757 |
<I/σ(I)> | 10.1 | 1.2 |
Completeness [%] | 97.5 | 81.2 |
Redundancy | 8.6 | 3.5 |
CC(1/2) | 0.997 | 0.401 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.09 M Sodium nitrate, 0.09 M Sodium phosphate dibasic, 0.09M Ammonium sulfate, 0.1 M Imidazole/MES, pH 6.5, 30% ethylene glycol/PEG8k |