6HOL
Structure of ATG14 LIR motif bound to GABARAPL1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-10 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97 |
Spacegroup name | P 1 |
Unit cell lengths | 34.460, 41.620, 46.240 |
Unit cell angles | 86.08, 76.27, 86.70 |
Refinement procedure
Resolution | 41.485 - 1.400 |
R-factor | 0.1655 |
Rwork | 0.164 |
R-free | 0.20280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2r2q |
RMSD bond length | 0.015 |
RMSD bond angle | 1.347 |
Data reduction software | xia2 |
Data scaling software | DIALS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.485 | 1.450 |
High resolution limit [Å] | 1.400 | 1.400 |
Rmerge | 0.070 | 0.710 |
Rmeas | 0.100 | 0.900 |
Rpim | 0.060 | 0.550 |
Number of reflections | 45978 | 4496 |
<I/σ(I)> | 6.2 | 1.3 |
Completeness [%] | 93.3 | 90.33 |
Redundancy | 2.4 | 2.4 |
CC(1/2) | 0.990 | 0.460 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 289 | 1M LiCl, 0.1M HEPES pH7, 20% PEG 6000 |