6HLL
Crystal structure of the Neurokinin 1 receptor in complex with the small molecule antagonist CP-99,994
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-19 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.00003 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 61.996, 122.733, 286.494 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.916 - 3.270 |
R-factor | 0.2278 |
Rwork | 0.225 |
R-free | 0.27510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zjc |
RMSD bond length | 0.004 |
RMSD bond angle | 0.911 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.880 | 3.530 |
High resolution limit [Å] | 3.270 | 3.270 |
Rpim | 0.125 | 0.886 |
Number of reflections | 17430 | 3479 |
<I/σ(I)> | 5.1 | 1.1 |
Completeness [%] | 99.9 | 99.6 |
Redundancy | 32.2 | 29.6 |
CC(1/2) | 0.990 | 0.311 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 6 | 293 | 100 mM MES pH 6.0, 31% (v/v) PEG400, 190-210 mM potassium acetate, 2.4% (v/v) 2,5-hexanediol and 50 uM CP-99,994 |