Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6HFN

Human dihydroorotase mutant F1563L co-crystallized with carbamoyl aspartate at pH 7.5

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2014-01-22
DetectorDECTRIS PILATUS 6M
Wavelength(s)1
Spacegroup nameC 2 2 21
Unit cell lengths81.865, 159.200, 60.985
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.963 - 1.450
R-factor0.119748598896
Rwork0.118
R-free0.14483
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4c6i
RMSD bond length0.011
RMSD bond angle1.189
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.9631.500
High resolution limit [Å]1.4501.450
Rmeas0.0410.739
Number of reflections697406772
<I/σ(I)>24.142.3
Completeness [%]98.496.6
Redundancy6.66.1
CC(1/2)1.0000.847
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5291Protein at 2-3 mg/ml in 20 mM Tris pH 8, 0.15 M NaCl, 0.02 mM zinc sulfate, 0.2 mM TCEP with 4 mM carbamoyl asparate. Mother liquor: 2.5-3 M potassium formate, 0.1 M HEPES pH 7.5

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon