6HET
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with the NVP-BHG712 derivative AT055
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-15 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.03318 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 32.826, 107.404, 40.577 |
Unit cell angles | 90.00, 108.72, 90.00 |
Refinement procedure
Resolution | 38.429 - 1.208 |
R-factor | 0.1915 |
Rwork | 0.191 |
R-free | 0.21030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6fnf |
RMSD bond length | 0.009 |
RMSD bond angle | 1.126 |
Data reduction software | XDS (XDSapp 2.0) |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.430 | 1.280 |
High resolution limit [Å] | 1.208 | 1.208 |
Rmeas | 0.142 | |
Number of reflections | 80126 | 12434 |
<I/σ(I)> | 7.08 | 0.4 |
Completeness [%] | 98.1 | 94.2 |
Redundancy | 6.59 | 6.49 |
CC(1/2) | 0.998 | 0.109 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 37.5 % MPD/PEG1000/PEG3350 (MD), 0.1 M Amino Acids Mix (MD), 0.1 M MES pH 6.5 |