6HEL
Structure of human USP25
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-11 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9790 |
Spacegroup name | I 4 |
Unit cell lengths | 139.184, 139.184, 190.470 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 59.166 - 2.941 |
R-factor | 0.2551 |
Rwork | 0.254 |
R-free | 0.27750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6HEH and 6HEK |
RMSD bond length | 0.018 |
RMSD bond angle | 1.134 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.170 | 3.390 |
High resolution limit [Å] | 2.940 | 2.940 |
Rmerge | 0.052 | 1.430 |
Rmeas | 0.058 | 1.570 |
Number of reflections | 20988 | 1050 |
<I/σ(I)> | 15.9 | 1.2 |
Completeness [%] | 93.4 | 70.1 |
Redundancy | 5.3 | 5.9 |
CC(1/2) | 0.999 | 0.501 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | 12% (w/v) PEG 3350, 167 mM magnesium acetate |