6HC5
The structure of the G. violaceus guanidine II riboswitch P2 stem-loop with audouine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-29 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9196 |
Spacegroup name | H 3 2 |
Unit cell lengths | 55.826, 55.826, 133.363 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 27.913 - 1.413 |
R-factor | 0.1765 |
Rwork | 0.175 |
R-free | 0.19890 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.801 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.14_3228: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.913 | 1.437 |
High resolution limit [Å] | 1.413 | 1.413 |
Rmerge | 0.047 | 1.920 |
Rpim | 0.021 | 0.813 |
Number of reflections | 28892 | 775 |
<I/σ(I)> | 18.1 | |
Completeness [%] | 98.0 | 100 |
Redundancy | 6.3 | 6.5 |
CC(1/2) | 1.000 | 0.428 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 293 | 0.01 M Magnesium Acetate, 0.05 M MES pH 5.0, 2.5 M Ammonium Sulfate |