Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6HBX

The structure of the G. violaceus guanidine II riboswitch P2 stem-loop with ethylguanidine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2017-10-05
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9197
Spacegroup nameH 3 2
Unit cell lengths56.070, 56.070, 134.800
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution28.035 - 1.540
R-factor0.1917
Rwork0.190
R-free0.23000
Structure solution methodSAD
RMSD bond length0.010
RMSD bond angle1.380
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.14_3228: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]28.0351.570
High resolution limit [Å]1.5401.540
Rmerge0.0531.436
Rpim0.0260.696
Number of reflections22399584
<I/σ(I)>17.3
Completeness [%]97.796.5
Redundancy4.95.1
CC(1/2)1.0000.484
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.62930.01 M Magnesium Acetate, 0.05 M MES pH 5.6, 2.5 M Ammonium Sulfate

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon