Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6HB7

Crystal structure of E. coli tyrRS in complex with 5'-O-(N-L-tyrosyl)sulfamoyl-N3-methyluridine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 1
Synchrotron siteSOLEIL
BeamlinePROXIMA 1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-06-09
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97857
Spacegroup nameP 1 21 1
Unit cell lengths81.622, 64.613, 89.670
Unit cell angles90.00, 100.98, 90.00
Refinement procedure
Resolution27.850 - 1.900
R-factor0.201
Rwork0.200
R-free0.23400
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.010
Data reduction softwareXDS
Data scaling softwareAimless (0.6.2)
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.3)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]88.03088.0301.960
High resolution limit [Å]1.8605.8801.860
Rmerge0.0950.0450.777
Rmeas0.1130.0530.923
Rpim0.0610.0270.489
Total number of observations272521
Number of reflections76335245311131
<I/σ(I)>9
Completeness [%]98.896.899.2
Redundancy3.63.53.6
CC(1/2)0.9950.9980.637
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5293Holo enzyme crystals were grown in 0.1 M BIS-TRIS pH 6.5, 10-15% PEG 3350, 20 mM glutamate (1M stock solution adjusted to pH 6), 20% (v/v) ethylene glycol For soaking crystals were transferred to drop containing mother liquor supplemented with 2 mM inhibitor.

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon