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6HAU

KSHV PAN RNA Mta-response element fragment complexed with the globular domain of herpesvirus saimiri ORF57

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-07-07
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9282
Spacegroup nameP 21 21 21
Unit cell lengths58.657, 105.261, 118.554
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution78.710 - 1.860
R-factor0.16
Rwork0.158
R-free0.19700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Apo HVS ORF57
RMSD bond length0.008
RMSD bond angle0.924
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX ((1.13_2998: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]78.7101.925
High resolution limit [Å]1.8581.858
Rmerge0.0730.725
Rmeas0.0790.777
Number of reflections625776135
<I/σ(I)>18.232.67
Completeness [%]99.999.79
Redundancy7.57.7
CC(1/2)0.9990.798
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52770.06 M divalents (0.3M Magnesium chloride hexahydrate; 0.3M Calcium chloride dehydrate), 0.1 M (Imidazole, MES) Buffer System pH 6.5, 50 % v/v GOL_P4K (Morpheus HT96 A3 Molecular Dimensions)

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PDB entries from 2024-07-31

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