Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6HA0

Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2017-07-07
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97928
Spacegroup nameP 1 21 1
Unit cell lengths38.739, 54.641, 67.944
Unit cell angles90.00, 97.73, 90.00
Refinement procedure
Resolution67.330 - 1.850
R-factor0.1788
Rwork0.176
R-free0.23280
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6h9w
RMSD bond length0.016
RMSD bond angle1.718
Data reduction softwareXDS
Data scaling softwareAimless (0.5.31)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]67.33054.6401.950
High resolution limit [Å]1.8505.8601.850
Rmerge0.0880.0350.699
Rmeas0.1030.0410.824
Rpim0.0530.0210.431
Number of reflections238118033447
<I/σ(I)>9.5
Completeness [%]99.299.598.9
Redundancy3.63.53.5
CC(1/2)0.9970.9960.746
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29425%PEG 6000 0.1M Na-HEPES pH7.5 0.1M LiCl

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon