6HA0
Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97928 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 38.739, 54.641, 67.944 |
Unit cell angles | 90.00, 97.73, 90.00 |
Refinement procedure
Resolution | 67.330 - 1.850 |
R-factor | 0.1788 |
Rwork | 0.176 |
R-free | 0.23280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6h9w |
RMSD bond length | 0.016 |
RMSD bond angle | 1.718 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.31) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 67.330 | 54.640 | 1.950 |
High resolution limit [Å] | 1.850 | 5.860 | 1.850 |
Rmerge | 0.088 | 0.035 | 0.699 |
Rmeas | 0.103 | 0.041 | 0.824 |
Rpim | 0.053 | 0.021 | 0.431 |
Number of reflections | 23811 | 803 | 3447 |
<I/σ(I)> | 9.5 | ||
Completeness [%] | 99.2 | 99.5 | 98.9 |
Redundancy | 3.6 | 3.5 | 3.5 |
CC(1/2) | 0.997 | 0.996 | 0.746 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294 | 25%PEG 6000 0.1M Na-HEPES pH7.5 0.1M LiCl |