6H9V
Crystal structure of deaminated P domain from norovirus strain Saga GII-4 in complex with Fuc
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-06 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.542 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 54.290, 83.950, 65.130 |
Unit cell angles | 90.00, 95.78, 90.00 |
Refinement procedure
Resolution | 39.577 - 1.520 |
R-factor | 0.1491 |
Rwork | 0.147 |
R-free | 0.18280 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.932 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.580 | 1.560 |
High resolution limit [Å] | 1.520 | 1.520 |
Number of reflections | 88343 | |
<I/σ(I)> | 11.18 | |
Completeness [%] | 99.0 | 99.5 |
Redundancy | 4.62 | |
CC(1/2) | 0.999 | 0.316 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | PEG 3350, Mg formate |