6H7B
Structure of Leishmania PABP1 (domain J) complexed with a peptide containing the PAM2 motif of eIF4E4.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-02 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9686 |
Spacegroup name | P 65 |
Unit cell lengths | 83.330, 83.330, 58.160 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 36.083 - 1.890 |
R-factor | 0.1989 |
Rwork | 0.197 |
R-free | 0.22950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6h7a |
RMSD bond length | 0.004 |
RMSD bond angle | 0.583 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.100 | 1.958 |
High resolution limit [Å] | 1.890 | 1.890 |
Rmerge | 0.057 | 1.500 |
Rmeas | 0.060 | 1.607 |
Rpim | 0.019 | 0.574 |
Number of reflections | 18507 | 1829 |
<I/σ(I)> | 18.54 | |
Completeness [%] | 99.9 | 99.84 |
Redundancy | 9.8 | 7.8 |
CC(1/2) | 0.999 | 0.586 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 0.2M ammonium sulphate; 0.1M MES; 20% PEG 8000 |