6H22
Crystal structure of Mdm2 bound to a stapled peptide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04 |
| Synchrotron site | Diamond |
| Beamline | I04 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-08-06 |
| Detector | DECTRIS PILATUS 6M-F |
| Wavelength(s) | 0.9795 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 64.416, 72.186, 45.124 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.062 - 2.006 |
| R-factor | 0.2122 |
| Rwork | 0.211 |
| R-free | 0.23840 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.882 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.32) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 72.190 | 72.190 | 2.110 |
| High resolution limit [Å] | 2.000 | 6.340 | 2.010 |
| Rmerge | 0.111 | 0.037 | 0.732 |
| Rmeas | 0.123 | 0.042 | 0.811 |
| Rpim | 0.053 | 0.019 | 0.344 |
| Number of reflections | 14472 | 548 | 1898 |
| <I/σ(I)> | 9.4 | ||
| Completeness [%] | 98.6 | 99.9 | 90.9 |
| Redundancy | 5.4 | 4.6 | 5.4 |
| CC(1/2) | 0.998 | 0.999 | 0.908 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 292.15 | 1.1 M sodium malonate dibasic, 0.1 M HEPES pH 7.0, 0.5% v/v Jeffamine ED-2003 |






