6GYF
Crystal structure of NadR protein in complex with NR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-12 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9762 |
Spacegroup name | P 64 2 2 |
Unit cell lengths | 165.090, 165.090, 193.050 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.827 - 2.700 |
R-factor | 0.1996 |
Rwork | 0.198 |
R-free | 0.23880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6gye |
RMSD bond length | 0.009 |
RMSD bond angle | 1.054 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_3150)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.827 | 2.800 |
High resolution limit [Å] | 2.700 | 2.700 |
Number of reflections | 41587 | |
<I/σ(I)> | 10 | |
Completeness [%] | 96.0 | |
Redundancy | 11 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 1M (NH4)2SO4, 100mM Na Citrate pH 6.5, 10mM MgCl2 and 10% glucose |