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6GVZ

GII.1 human norovirus protruding domain in complex with glycochenodeoxycholate (GCDCA)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2017-10-26
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.967700
Spacegroup nameC 2 2 21
Unit cell lengths74.980, 99.390, 79.280
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.892 - 1.540
R-factor0.1689
Rwork0.168
R-free0.18890
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4rox
RMSD bond length0.006
RMSD bond angle0.837
Data reduction softwareXDS (VERSION Jun 1, 2017)
Data scaling softwareXSCALE (VERSION Jun 1, 2017)
Phasing softwarePHASER
Refinement softwarePHENIX ((1.13_2998: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]59.8601.590
High resolution limit [Å]1.5401.540
Rmerge0.0570.667
Rmeas0.0590.694
Rpim0.0160.188
Number of reflections441744133
<I/σ(I)>27.73.57
Completeness [%]99.494.22
Redundancy13.713.3
CC(1/2)0.9990.938
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2910,1M Sodium chloride 0,005 M Magnesium chloride hexahydrate 0,1 M Tris 8,5 30 % w/v PEG 2000 MME

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