6GVL
Second pair of Fibronectin type III domains of integrin beta4 bound to the bullous pemphigoid antigen BP230 (BPAG1e)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-30 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 104.520, 60.730, 40.780 |
Unit cell angles | 90.00, 113.71, 90.00 |
Refinement procedure
Resolution | 47.850 - 2.050 |
R-factor | 0.225 |
Rwork | 0.224 |
R-free | 0.23630 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | D_1200010415 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.496 |
Data reduction software | XDS (May 1, 2016) |
Data scaling software | XSCALE (May 1, 2016) |
Phasing software | PHENIX (dev_2499) |
Refinement software | PHENIX ((dev_2499: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.100 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmeas | 0.010 | 1.950 |
Number of reflections | 14766 | 1091 |
<I/σ(I)> | 11.7 | 1.28 |
Completeness [%] | 99.5 | 100 |
Redundancy | 6.7 | 6.9 |
CC(1/2) | 0.998 | 0.694 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.2 | 298 | 0.1 phosphate-citrate pH 4.2, 20% PEG 8000, 0.2 M NaCl |