6GQC
Crystal Structure of the PSMalpha3 Peptide Mutant G16A Forming Cross-Alpha Amyloid-like Fibril
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-17 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.8729 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 53.270, 13.300, 25.800 |
Unit cell angles | 90.00, 111.91, 90.00 |
Refinement procedure
Resolution | 14.670 - 1.400 |
R-factor | 0.1548 |
Rwork | 0.151 |
R-free | 0.19280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5i55 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.385 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 14.670 | 14.670 | 1.440 |
High resolution limit [Å] | 1.400 | 6.260 | 1.400 |
Rmerge | 0.124 | 0.101 | 0.754 |
Rmeas | 0.135 | 0.114 | 0.822 |
Number of reflections | 3478 | 46 | 267 |
<I/σ(I)> | 8.13 | 14.79 | 2.28 |
Completeness [%] | 99.0 | 90.2 | 100 |
Redundancy | 6.302 | 5.37 | 6.131 |
CC(1/2) | 0.994 | 0.996 | 0.849 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | Reservoir contained 0.1 M sodium acetate pH 4.6, 0.01 M Cobalt chloride, 1.0 M 1,6-Hexanediol with cryo protection of 20% ethylene glycol |