6GOF
KRAS full length G12D GPPNHP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-25 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.979 |
Spacegroup name | H 3 |
Unit cell lengths | 78.630, 78.630, 77.540 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.310 - 1.980 |
R-factor | 0.18155 |
Rwork | 0.178 |
R-free | 0.25183 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4dst |
RMSD bond length | 0.010 |
RMSD bond angle | 1.496 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.310 | 2.030 |
High resolution limit [Å] | 1.980 | 1.980 |
Rmerge | 0.152 | 1.320 |
Rmeas | 0.171 | 1.480 |
Rpim | 0.054 | |
Number of reflections | 12435 | |
<I/σ(I)> | 11.2 | 1.7 |
Completeness [%] | 99.9 | 100 |
Redundancy | 10.1 | 9.9 |
CC(1/2) | 0.560 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 0.1 M, TrisCl, 0.2 M NaOAc and 30-35 % PEG 4000 |