6GNY
Crystal structure of the MAJIN-TERB2 heterotetrameric complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-03 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 59.970, 88.390, 111.670 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.350 - 1.850 |
R-factor | 0.1893 |
Rwork | 0.188 |
R-free | 0.20720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6gnx |
RMSD bond length | 0.003 |
RMSD bond angle | 0.627 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_3126)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.350 | 1.890 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmeas | 0.039 | 1.374 |
Rpim | 0.014 | 0.504 |
Number of reflections | 25741 | 1565 |
<I/σ(I)> | 23.1 | 1.5 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.3 | 7.3 |
CC(1/2) | 0.999 | 0.744 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.12M 1,6-Hexanediol; 0.12M 1-Butanol; 0.12M 1,2-Propanediol (racemic); 0.12M 2-Propanol; 0.12M 1,4-Butanediol; 0.12M 1,3-Propanediol; 39.1 mM bicine pH 5.03; 60.9 mM Trizma pH 10.83; 18.3% w/v PEG 1000; 18.3% w/v PEG 3350; 18.3% v/v MPD |