6GN2
Racemic crystal structure of A-DNA duplex formed from d(CCCGGG) in space group R3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-X |
Temperature [K] | 150 |
Detector technology | PIXEL |
Collection date | 2015-07-02 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.5417 |
Spacegroup name | H -3 |
Unit cell lengths | 105.413, 105.413, 56.131 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 23.910 - 2.480 |
R-factor | 0.2601 |
Rwork | 0.259 |
R-free | 0.27230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vt5 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.392 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 23.910 | 2.570 |
High resolution limit [Å] | 2.480 | 2.480 |
Rmerge | 0.057 | 0.425 |
Rmeas | 0.081 | 0.601 |
Number of reflections | 8101 | 729 |
<I/σ(I)> | 10.71 | 2.02 |
Completeness [%] | 97.0 | 89 |
Redundancy | 1.9 | 1.8 |
CC(1/2) | 0.997 | 0.926 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | Ammonium sulfate, Tris |