6GKS
X-ray structure determined from recombinant Charcot-Leyden crystal
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-09-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 48.900, 48.900, 258.629 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.105 - 1.380 |
R-factor | 0.1686 |
Rwork | 0.168 |
R-free | 0.17940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1lcl |
RMSD bond length | 0.005 |
RMSD bond angle | 0.909 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.420 |
High resolution limit [Å] | 1.340 | 1.340 |
Rmeas | 0.076 | 0.720 |
Number of reflections | 39313 | 4579 |
<I/σ(I)> | 25.64 | 5.8 |
Completeness [%] | 92.4 | 68.3 |
Redundancy | 17.9 | 14.6 |
CC(1/2) | 0.990 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 7.4 | 298 | Upon removal of the N-terminal His-tag by TEV protease, at a protease:target protein ratio of 1:100 (w/w), recombinant galectin-10 autocrystallized in PBS buffer. |