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6GGC

p53 cancer mutant Y220C in complex with small-molecule stabilizer PK9320

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyPIXEL
Collection date2015-09-26
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97949
Spacegroup nameP 21 21 21
Unit cell lengths64.894, 71.172, 105.016
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.500 - 1.240
R-factor0.1508
Rwork0.150
R-free0.16620
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)2j1x
RMSD bond length0.005
RMSD bond angle0.808
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.5001.310
High resolution limit [Å]1.2401.240
Rmerge0.0380.510
Number of reflections137227
<I/σ(I)>17.43.3
Completeness [%]99.398.3
Redundancy4.64.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293Protein solution: 6 mg/ml protein in 25 mM sodium phosphate, ph 7.2, 150 mm KCl, 5 mm DTT. Reservoir buffer: 100 mm HEPES, pH 7.2, 19% (w/v) polyethylene glycol 4000, 5 mm DTT. Soaking buffer: Saturated solution of compound in 100 mm HEPES, ph 7.2, 10 mM sodium phosphate, ph 7.2, 19% (w/v) polyethylene glycol 4000, 20 % (v/v) glycerol, 150 mm KCl.

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