6GE8
Crystal structure of Mycobacterium tuberculosis BioA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-16 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9762 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.748, 66.559, 202.504 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.850 - 1.869 |
R-factor | 0.1661 |
Rwork | 0.164 |
R-free | 0.20610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3bv0 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.058 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.850 | 1.936 |
High resolution limit [Å] | 1.869 | 1.869 |
Rmerge | 0.133 | 1.393 |
Rmeas | 0.140 | 1.461 |
Rpim | 0.041 | 0.432 |
Number of reflections | 71080 | 6947 |
<I/σ(I)> | 12.41 | 1.44 |
Completeness [%] | 99.8 | 99.67 |
Redundancy | 11.4 | 11.2 |
CC(1/2) | 0.998 | 0.579 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | mtBioA was dialysed against fresh PLP (50 uM), desalted (25 mM HEPES pH 7.5, 50 mM NaCl) and concentrated to 10 mg/mL. Wells consisted of 100 mM HEPES pH 7.5, 100 mM MgCl2, and 5 mM small molecule ligand, and rows 1-6 of the plate contained a range of 9-14% w/v PEG 8000 |