6GCE
DNA binding domain of restriction endonuclease McrBC in complex with 5-formylcytosine DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX II BEAMLINE I911-3 |
Synchrotron site | MAX II |
Beamline | I911-3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-04-13 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.001 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.175, 69.988, 144.265 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.089 - 1.600 |
R-factor | 0.1712 |
Rwork | 0.167 |
R-free | 0.20530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ssc |
RMSD bond length | 0.010 |
RMSD bond angle | 1.046 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | PHENIX (1.8.3_1479) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.090 | 1.657 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.054 | 0.448 |
Number of reflections | 92903 | 9718 |
<I/σ(I)> | 17.15 | 2.39 |
Completeness [%] | 99.6 | 99.92 |
Redundancy | 6.3 | 6.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.2 M LiCl, 22% PEG4000 |