6GC1
Crystal structure of Trx-like and NHL repeat containing domains of human NHLRC2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-30 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.9677 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 103.284, 103.812, 114.978 |
Unit cell angles | 90.00, 100.77, 90.00 |
Refinement procedure
Resolution | 47.770 - 2.700 |
R-factor | 0.248 |
Rwork | 0.246 |
R-free | 0.28720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2hyx |
RMSD bond length | 0.009 |
RMSD bond angle | 1.375 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0222) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.770 | 47.770 | 2.770 |
High resolution limit [Å] | 2.700 | 12.070 | 2.700 |
Rmerge | 0.130 | 0.043 | 1.088 |
Rmeas | 0.147 | 0.049 | 1.220 |
Number of reflections | 65063 | 762 | 4852 |
<I/σ(I)> | 8.99 | 24.58 | 1.29 |
Completeness [%] | 98.9 | 96.9 | 99.5 |
Redundancy | 4.719 | 4.331 | 4.892 |
CC(1/2) | 0.994 | 0.997 | 0.510 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 295 | 0.1 M BisTris Propane pH 6.5, 0.2 M K/Na Tartrate, 18% PEG 3350 |