6GBF
The Structure of variant R369A of the Mo-insertase domain Cnx1E from Arabidopsis thaliana in complex with AMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91840 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 66.030, 123.970, 132.680 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.070 - 1.712 |
R-factor | 0.174 |
Rwork | 0.173 |
R-free | 0.19900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5g2r |
RMSD bond length | 0.010 |
RMSD bond angle | 1.070 |
Data reduction software | XDS (Jun 1, 2017) |
Data scaling software | STARANISO (1.10.9) |
Phasing software | PHASER (2.8.1) |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 66.340 | 1.849 |
High resolution limit [Å] | 1.712 | 1.712 |
Rmerge | 0.042 | 0.770 |
Rmeas | 0.054 | 1.022 |
Rpim | 0.034 | 0.665 |
Number of reflections | 42230 | 2113 |
<I/σ(I)> | 16.9 | 1.5 |
Completeness [%] | 71.7 | 17.7 |
Redundancy | 4.4 | 4.2 |
CC(1/2) | 0.999 | 0.615 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M imidazole, 0.1 M MES pH 6.5; 0.06 M sodium nitrate, 0.06 M sodium phosphate, 0.06 M ammonium sulfate; 20 % (v/v) PEG 500 MME, 10 % PEG 8000 |