Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6GB9

The Structure of variant S328A of the Mo-insertase domain Cnx1E from Arabidopsis thaliana in complex with AMP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-06-03
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9184
Spacegroup nameI 2 2 2
Unit cell lengths66.020, 123.800, 132.810
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution66.407 - 1.670
R-factor0.186
Rwork0.185
R-free0.21500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5g2r
RMSD bond length0.010
RMSD bond angle1.070
Data reduction softwareXDS (Jun 1, 2017)
Data scaling softwareSTARANISO (1.10.9)
Phasing softwarePHASER (2.8.1)
Refinement softwareBUSTER (2.10.3)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]66.4071.841
High resolution limit [Å]1.6701.670
Rmerge0.1190.772
Rmeas0.1540.991
Rpim0.0970.615
Number of reflections419272096
<I/σ(I)>71.7
Completeness [%]66.113.2
Redundancy4.54.5
CC(1/2)0.9900.675
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52930.1 M sodium formate, 0.1 M ammonium acetate, 0.1 M sodium citrate tribasic dihydrate, 0.1 M sodium potassium tartrate tetrahydrate, 0.1 M sodium oxamate; 0.1 M Tris BICINE pH 8.5; 10 % (w/v) PEG 4000, 20 % (v/v) glycerol

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon